Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928130.1_cds_XP_016475782.1_67679
CDS Infomation

[gene=LOC107797408] [db_xref=GeneID:107797408] [protein=uncharacterized protein LOC107797408 isoform X3] [protein_id=XP_016475782.1] [location=complement(join(1392..1599,4372..4415,4531..4631,4708..5095,5216..5556,5636..5696,5796..5998,6166..6229,6305..6462,6734..6898,6984..7029))] [gbkey=CDS]
Sequence

ATGGACCTTTTAGATGATATTTTGGCTGATGGTGCTTCAAAGACCGTCAAGGCTGGCGGC
AAGTTTCAACCCAAGGCAAAGCCTCGTCCAGTGAAAAAAGGTCCAGCTGTTGCGGCCTCA
ACAGTTTCTTTGACGTCAAAACCCACTGGTGATACTGTAGCAACTGATTCAATTGAGGCT
CTTAAGAAGGATGGAAAAAATCCCCAAAATTACGATGAACAAAGCTCTGTGTTAGCGGAA
CCTTCCTTGGAGCATCCTCTTGCTGCAGAAACTTTGTGTCCATCAGTTGGTTCATATCTA
GATACAAGTACGGTAGTGCCTGATAACAGTGAAGATTCGAAAACTTGTCTTGAGAAATCC
GAGGGAGAGTATGCAGGCATATATGTAGGTTTGGATTCGTTTGATGATTTACTTCCTATC
TCAAGCGCCATAGAAAATTCTAGTCCCGCTACAAATCCATCTGCTGTTCATGTTGCTGGT
GCAGAGAAGGGACAAGAACAACTTTCAATTCCAGTTTCTTCAGTTGATGATTCAGCTCCT
AGCACTTCTAATCTTCAACCTGATGAAGTGGCAGCATGCCAAGATCCATTAACTTGTCAA
GGAAGTGTTGTTCCTGTTAGTGGAAGTTGTCAGATGGAGATGGACAGCTATCCTTCCTTG
GAAGCAGCAGATATCCTGGGGGTAACTACTACATCTGGGCAGAGTACCAGAAGGTTTCAA
CCCAAGTCCAAGCTACAAGTATACAGAGAGAGATACGACACAAGCATCCCTGATTCAGAT
GCAGTAGAATCAGTTTCATGTCAGCCAAATTCACACTCAGTTCATTCTGAAATGGATTTT
GTGGATAGAGTGAAGGAACATGGATTCCCTGCTGATGATGTCCTTGATTTCTCAGCCAGA
GGATTTGATAATAATATTATTACAGAATCTACTCATGAATTTCATGTTCATGAAGAATAT
GTTATCGAAGCTTCGCATTCAGATGTTGGCATCCCAGCAGAACTCCCTGAATCTACTTGT
CAGATGCCTGAGGAACCTGTACATCAGAGGCCAAAGACTAAAAAGCAAAAATTGCCTGCA
TCTGATCTTTCTGCAATTACTGAAGAGAATGGAGCGGGTAGATCATTAAGGAGTAGAAGA
AAGTCCGTAAATGCAAATAGACTAGTAGATGAGTCTGAAGTAGTAGCGGATGATGGGGAA
TATGTGCCTGAACAACCTAATGATTCTGTTACAAATGGTAATGATGAGGATCTTCTGGTG
GAAAATGAATCACAAGGGAAAAAAGTACAGAAAAAGTCAAAGAGAACAGTTGCCGAGGAT
AGAAAGCAAGTTAGGAAGAGTAAAAAGACCACTGAAGCTTCAGACCAGGCAGCCAACAAG
AAACCTAAGAAGTTTTCTCACTCCACTCGTCAAAAGAGGAGACAAGTGAACAAGGCTTTG
CTTGAGGCTCCCGAGTATGAGATTGACTACCAAAAGGTACCTATTAAGGATCTAATTATA
TTAGGAGAGCACAGAGAGCGGCTGGCGAAAAAAGATGCTGCAGCGTCACAAATACCTACT
ACAGATCAGAGTGCTGGTGCTTCTGTTTCTAATTATAATGAGGATGAGACCTATCCTTCA
GATGCCGGCGCAGAAGATAATGATCGTCAAATAGGTTCTCGGGCTCAAGATTCTTCTGCC
TACTTCAATTATCAAACTTATATGGACAAAACACCCAGCACAAGGTGGTCAAAACAGGAA
ACAGAACTGTTCTATGAGGTACATCCCTCTCATTTGTAG

Peptide Sequence

PEP ID

XP_016475782.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107797408 isoform X3 [Nicotiana tabacum]
Sequence

MDLLDDILADGASKTVKAGGKFQPKAKPRPVKKGPAVAASTVSLTSKPTGDTVATDSIEA
LKKDGKNPQNYDEQSSVLAEPSLEHPLAAETLCPSVGSYLDTSTVVPDNSEDSKTCLEKS
EGEYAGIYVGLDSFDDLLPISSAIENSSPATNPSAVHVAGAEKGQEQLSIPVSSVDDSAP
STSNLQPDEVAACQDPLTCQGSVVPVSGSCQMEMDSYPSLEAADILGVTTTSGQSTRRFQ
PKSKLQVYRERYDTSIPDSDAVESVSCQPNSHSVHSEMDFVDRVKEHGFPADDVLDFSAR
GFDNNIITESTHEFHVHEEYVIEASHSDVGIPAELPESTCQMPEEPVHQRPKTKKQKLPA
SDLSAITEENGAGRSLRSRRKSVNANRLVDESEVVADDGEYVPEQPNDSVTNGNDEDLLV
ENESQGKKVQKKSKRTVAEDRKQVRKSKKTTEASDQAANKKPKKFSHSTRQKRRQVNKAL
LEAPEYEIDYQKVPIKDLIILGEHRERLAKKDAAASQIPTTDQSAGASVSNYNEDETYPS
DAGAEDNDRQIGSRAQDSSAYFNYQTYMDKTPSTRWSKQETELFYEVHPSHL

Transcript Sequence

Gene sequence data has not been registered.